Browse of TCMCG017C14262 protein

CDS

Accession Number	TCMCG017C14262
gbkey	CDS
Protein Id	OMO94696.1
Location	join(79361..79573,80002..80076,81063..81272,81605..81763,82022..82032,82128..82398,82480..82563,82795..84842,85343..85499,85756..86013)
Organism	Corchorus olitorius
locus_tag	COLO4_16205

Protein

Length	1161aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA215141, BioSample:SAMN03160584
db_source	AWUE01015983.1
Definition	putative DNA double-strand break repair rad50 ATPase [Corchorus olitorius]
Locus_tag	COLO4_16205

EGGNOG-MAPPER Annotation

COG_category	S
Description	Nuclear matrix constituent protein 1-like
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000229        [VIEW IN EMBL-EBI] GO:0000785        [VIEW IN EMBL-EBI] GO:0000789        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005635        [VIEW IN EMBL-EBI] GO:0005652        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0005694        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005829        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0006997        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0012505        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0031967        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031975        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032535        [VIEW IN EMBL-EBI] GO:0034399        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043228        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043232        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044427        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0065008        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:0090066        [VIEW IN EMBL-EBI] GO:0097298        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTTTACGCCGCAGAAGAAAGTGTGGTCGAATTGGTCGCTGACGCCCGGGAAGAAAGTCGACGGGTCGGGTTCGGATCCAGACTCCAACGGGGTTGCTTTAGGGAAAGGCAAAGGAGCGGCTTTTGCAGAGCCGGTTACTCCTAATGGAAACGGTCTTCGGTTGGAGGACCACGAAGGGGTGCCCGAGAAAGTTGTTCGACTCGAAGCTGAGATAAGCACCATGATATGGAACTATGATATAGTAGTTGGTGTGCTGAATTTTGGGGTAGCATTAGTAGCTAGGTCGCTTTTTGAATACCAGTACAATATGGGGCTTCTCTTGATTGAAAAAAAGGAGTGGACTTCTAAGTTTGAGGAACTCAGTAAAGCACTGATAGAAGCAAAGGATGCTCTCAAACGAGAACAAGCAGCACATTTAATTGCAATGAATGATGTTGAGAAGCGTGAAGAAAATCTGAGCAAGGCCCTTGGTATTGAGAAGCAGTGTGTGCTTGATCTGGAGAAAGCTTTACGAGACATGCGTTCAGAAACTGCAGAAATCAAGTTTACTGCAGATTCAAAACTTTCTGAAGCAAATGCTTTGATTGCTAGTGTTGAGGAAAAATCTTTGGAGGTTGAGGCAAAATTGCGTGCAGCTGATGCCAAGCTTGCTGAGCCCCCTGAGTGGCAAGAAACACATGAGGCTACTTTGTCCAAACAGAGGGAAGACTTGCGGGAATGGGAGAAAAAACTGCAAGATGCAGAAGAGAGGCTGGCTAAAGGCCAAAGATATGTCAACCAAAGGGAGGAGAGAGCTAATGAGAATGATAGGCTCTTTAAGCAAAAAGAGAAGGACCTTGAAGAGGCACAAAAGAAGATTGATGCAGCTAACCAAACATTGAAGGAGAAAGAAGATGATATAAATAGCAGGCTAGCAAATTTAACTGTGAAAGAAAAGGAGTGGGATGTTGTGAGAGAGAAACTAGAGATGAAAGAAAAGGACTTACTTGAAATTGAAGAAAAGCTCAATGCCAGAGAGAAGGTTGAGATCCAGAAGCTCCTGGATGAGCATAATGCCATTCTGGATGAGAGGAAGCGTGAATTTGAGTTGGAAATTGATGAAAAGAGAAAATCCTTAGATGCAGAACTGAAAAGCAAGGTGATCGAAGTAGAGAAGAAGGAAATTGAGGTCAAACATATGGAAGAGAAGCTTTCAAAACGTGAGCAGGCAGCAGATAAGAAACTGGAGAAATTTAAAGAGAAAGAAAAGGAATTTGAAATTAAAGTGAAAAACCATAAGGAAAGAGAGAAGGCCATGAGATCTGAGGAGAAGAATTTAGAGATTGAGAGAAAGCAGATTCTAGCTGAGAAGGAAGATCTTTTGAGCCTTAAGGCCGAAGTTGAGAAGATAAGGGTTGAAAATGAAGAAAAGCTATTAAAGTTGCATGAGGAGGAAGATAGGCTTAGGGTAACTGAAGAAGAGAGGTCTGAGTATCTACGCTTGCAATCGGAGCTAAAAGGAGAATTAGAGAAATGCAGGCATAGGGAAGAACTACTTTTGAAGGAAGCTGAAGATTTGAAACGGCAGAAGGAGAATTTTGAAAGAGAGTGGGAAGAGCTAGATGAGAAAAGATTAGAGATTGAGAAAGAGTTGAAGAATATCAACCAACAAACAGAGAATTTTGAAAAACAGAAACTTGTTGAAGAGGAAAGGTTGAAGAATGAGAAGCAAAAGGCTGAGGACTACATAAAGAGGGAGCTTGAGGCTCTTGAAGATGCGAAACAAACATTTGCTGCCACCATGGAACATGAGCGGTCAGTGATAGCTGAGAGAGCTGAAAGTGAGAGAAGCCAAAGACTTCATGACCTTGAGTTGCAGAAAAGAAAGCTTGAGAGTGATATGCAAAGTAGATATGAAGAGATGGAGAAGGAACTAGGAGAGAGGAAGAAGTCATTTGAGGAAGAAAAGGAGAGAGAATTAGACAATATTAACTATTTAAGAGAGGTAGCTAGGAGAGAAATGGAAGAACTGAAGCAAGAAAGACTTAAGGTAGACAAAGAAAGGCAAGAAGTTAATGCTAGTAAGATGCATCTTGAAGGACAGCAAATTGAAATACGAAGAGACATTGATGATCTAGTGGGCCTCAGCAAGAAGTTGAAGGATCAACGAGAACAATTTATCAATGAGAGAAACCGTTTTATCTCATTTGTTGAGAAACATAAGAGTTGCAAGAATTGTGGTGAGATGACCTCAGCATTCATGCTATCTGATCTACAATCACTTCAGGAAATGGAGAATGAGGAAGTCCCTCCTCTTCCTACTTTGGCAGATGATTATATTGGAAATTTGGCTGCATCTGAGAGGCAGAAGGATGAGATATCACCAGTTGCTGCTGGATCTCCAATTTCTGGTGGAACCATGTCATGGCTTCGTAAATGCACCTCGAAAATATTCAAATTCTCTCCAGGTAAAGGTATTGGGCCTCATGCCATAACAAAATTAAATACCGAGGACCCACACTCTGGTGGGGAAGTCAATATGGAAGGCACATCGAAAGTTGAGTATGAGCCAGAGCTCTCGTTTGCTGCTGCAACTGAATCTTTGGACATTCATAGAGTCCAATCAGAAACTAGCACTAGAGATGTTGATGGTGGTCAGGACTTCTCAATTGATAATCAGAGCAACATTGATAGTAAGGAACTTGAAGTGTTGGGAGATTCTCAGACTTCTGATTTGAATCATGGAAAGCAGCTTCAGAAGAGAGGCAGGCCTAAGGCAAGAAGAACACGCTCAGTGAAGGCAGTTGTCAGAGATGCTGAGGCTGTTCTTGGGAGAGCTTTAGAGTCAAATGAGCTTGAGCATCCATCAAATGGGAATATTGATTCTGGTCTTGCTGATGGAGGAACATCTAGAAATGCACGGAAACGGAACCGTGCTCAATCATCTAAAAGAACTGAGAGTGAGCAAGATGATGTTAGTGAAGGACATGATAGTGTGGCGGCAGGCCAGCCAAGAAAGAGGCGCCAAAAAGTTGTTTTGGCTATGCCTACTCCTGGAGAGACGAGATATAATCTCCGAAGGCCCAAAACTGGGGTCACAGTTGCTAAGACCATATCTGACACAAATAGAGAGAAGGAAGTTGGTAAAGATGCAGGGGATCAAATTAACTACTCGGAAGCTCCCATTCCTGCAAGTGAAAATGGAGCTGCAAACGAGCATGGTGGTGCTGATCACTTTCTGCAACGGTGTGAGACAGCTCCGTACACAAAGGATGGTGATGCTGGTGCAACCAAAAATTTGGTTTCAAATGCGACACTAAGTGAGGAGGTGAATGGCACACCTGAAGGGGTTGGTGAGTATGGTGATGGAAATGACTACAGCAATGAATCACGCAGTGAAGGGCTTAAAGGCGAGGGTGAGGATGAGGAGGATGAAGAGGATGAGCTCGAGCATCCAGGTGAAGCCTCGGTAGGAAAGAAGCTTTGGAAATTTTTTACCACATGA

Protein:   MFTPQKKVWSNWSLTPGKKVDGSGSDPDSNGVALGKGKGAAFAEPVTPNGNGLRLEDHEGVPEKVVRLEAEISTMIWNYDIVVGVLNFGVALVARSLFEYQYNMGLLLIEKKEWTSKFEELSKALIEAKDALKREQAAHLIAMNDVEKREENLSKALGIEKQCVLDLEKALRDMRSETAEIKFTADSKLSEANALIASVEEKSLEVEAKLRAADAKLAEPPEWQETHEATLSKQREDLREWEKKLQDAEERLAKGQRYVNQREERANENDRLFKQKEKDLEEAQKKIDAANQTLKEKEDDINSRLANLTVKEKEWDVVREKLEMKEKDLLEIEEKLNAREKVEIQKLLDEHNAILDERKREFELEIDEKRKSLDAELKSKVIEVEKKEIEVKHMEEKLSKREQAADKKLEKFKEKEKEFEIKVKNHKEREKAMRSEEKNLEIERKQILAEKEDLLSLKAEVEKIRVENEEKLLKLHEEEDRLRVTEEERSEYLRLQSELKGELEKCRHREELLLKEAEDLKRQKENFEREWEELDEKRLEIEKELKNINQQTENFEKQKLVEEERLKNEKQKAEDYIKRELEALEDAKQTFAATMEHERSVIAERAESERSQRLHDLELQKRKLESDMQSRYEEMEKELGERKKSFEEEKERELDNINYLREVARREMEELKQERLKVDKERQEVNASKMHLEGQQIEIRRDIDDLVGLSKKLKDQREQFINERNRFISFVEKHKSCKNCGEMTSAFMLSDLQSLQEMENEEVPPLPTLADDYIGNLAASERQKDEISPVAAGSPISGGTMSWLRKCTSKIFKFSPGKGIGPHAITKLNTEDPHSGGEVNMEGTSKVEYEPELSFAAATESLDIHRVQSETSTRDVDGGQDFSIDNQSNIDSKELEVLGDSQTSDLNHGKQLQKRGRPKARRTRSVKAVVRDAEAVLGRALESNELEHPSNGNIDSGLADGGTSRNARKRNRAQSSKRTESEQDDVSEGHDSVAAGQPRKRRQKVVLAMPTPGETRYNLRRPKTGVTVAKTISDTNREKEVGKDAGDQINYSEAPIPASENGAANEHGGADHFLQRCETAPYTKDGDAGATKNLVSNATLSEEVNGTPEGVGEYGDGNDYSNESRSEGLKGEGEDEEDEEDELEHPGEASVGKKLWKFFTT